Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821197.1_cds_XP_016500689.1_14494
CDS Infomation

[gene=LOC107819119] [db_xref=GeneID:107819119] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016500689.1] [location=5969..7417] [gbkey=CDS]
Sequence

ATGTCAGGTCCTCCATCTGATCAAGGCAATAGCAGTAGTTCAGCAGCCAACATAGGTGGC
TGGTTACATTTTCTCCTTCATGATCATGATCATGATCATTATATAGGCCCTAATGTTGCT
GGTAGACTTGATGAGAAGCAGAAAATACAAAGCGTAGCTCCGAATAGTTCGGAAGATGCC
AAGCACTACGAGCCCCTTGTGGTTTCCATTGGTCCAATGCACCATGGGAAAGACCATCTT
CAAGCCATGGAGAAGTTCAAACGGTCACTAGCGCAGAAGTATGCAGAACGAATACGAGAA
GCGGATACGGCAGCTTTTGAAACAGTGTTGCTCAAAGCTCGGAATTGTTACTCTCACTCT
GTTCATTCTGTTTATAATGACCCTGACTGGTTTGTAATAATGTTTATCGATGCCTGCTTT
ATTCTTGAATTCTTATCCTCCGAGCTTGGAGGGAGTAGGTGGGTGGATATGAATATGAAG
AACCATGATAGAGATTTGGTGCGTCGTGACCTTTTACTGTTGGAGAATCAATTACCTTTT
GAGCTTCTCCAGATATTTTGTACATCTTTTATGCGTGGAAATGATTTCTCTTTGATGGTT
ATTATCATGTCGTTCCTCTTTAATCGGATGATAACAACAGTATCCGGTGTTTCTTCAACT
GATGATACATTAATTGATATTGATCATTTTGATGATTACATCGTGAACAATATGCCGCTG
CCGCGCCAGGAATCAGAACGATTCCCCCAAGTCTCTCACAAGCATCTTCTTCAACTTTTC
AGAGACCTATCGATCGAAGCAATTGGAGCTGGCCCTACAAAACTTGAAGAAGAAGAAGAA
GAAGATGATCTTGTTTATAATTACCCAAATTTATCAGTGACAGAGTTGAAGAAAGCGGGC
ATTCGCTGCAGGTGTGGAAAGGTTGGTGGTCGTCTTACTTATTTTTCCCCATCAGACATT
TATTTTAAATCATATGCGTTATCAGGGAAGTTGGTCCTTCCTCAACTAACTATCCACGAG
TGGACCAAGGCCTTGTTGTTAAACTTAGTTGCTTACGAATATTCGTGCAGCACACAAGAT
AATCCTTCAGGGATCTCAACTTACTTGAATTTCATGGGTAAGTTGATTAATCGAGAGGAA
GATGTTAAGGAGCTGCGAGGCAGGGGCATCATCAGCTACTCCATTGGCGACGATCAAGCA
GTGGTTGACCTCTTCAGAGATATAACAGCACATGTTGCTATGAACAATCCTCAAGCTTTT
AAGCATGTCAAACGACACATCTCAGCATACTTAGCAAGTAAAAGGCTCCCTCTAAGAGTT
TTTCTAGCTGAATTCAAGCAAAAATATTTTAGTGGTCCCTGGAATATTTTTGTGTTCCTT
GCTGTTATTTTCACGCTTGCAATGACTATAATTCAGACCATCTTCACAGCCATTCAGACT
TGTAAATAG

Peptide Sequence

PEP ID

XP_016500689.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MSGPPSDQGNSSSSAANIGGWLHFLLHDHDHDHYIGPNVAGRLDEKQKIQSVAPNSSEDA
KHYEPLVVSIGPMHHGKDHLQAMEKFKRSLAQKYAERIREADTAAFETVLLKARNCYSHS
VHSVYNDPDWFVIMFIDACFILEFLSSELGGSRWVDMNMKNHDRDLVRRDLLLLENQLPF
ELLQIFCTSFMRGNDFSLMVIIMSFLFNRMITTVSGVSSTDDTLIDIDHFDDYIVNNMPL
PRQESERFPQVSHKHLLQLFRDLSIEAIGAGPTKLEEEEEEDDLVYNYPNLSVTELKKAG
IRCRCGKVGGRLTYFSPSDIYFKSYALSGKLVLPQLTIHEWTKALLLNLVAYEYSCSTQD
NPSGISTYLNFMGKLINREEDVKELRGRGIISYSIGDDQAVVDLFRDITAHVAMNNPQAF
KHVKRHISAYLASKRLPLRVFLAEFKQKYFSGPWNIFVFLAVIFTLAMTIIQTIFTAIQT
CK

Transcript Sequence

Gene sequence data has not been registered.